Yes, it should be fairly easy for them to modify flashchat. You should probably make a post on their forums with the following info.

If they are using group numbers for their permissions :

Old Group Numbering:

1 => Administrator
2 => Moderator
3 => User
4 => Guest

New Group Numbering:

1 => Administrator
2 => GlobalModerator
3 => Moderator
4 => User
5 => Guest


If they are working off the USER_MEMBERSHIP_LEVEL field then here are the different values for that field they need to check for (GlobalModerator being the new one) :

Administrator
GlobalModerator
Moderator
User